PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462963299
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 147aa    MW: 15974.7 Da    PI: 11.9025
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462963299genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.91.4e-142772755
        AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               ++++++grW+Ae+r+p++   r r ++g+f t++eAa a++aa  +++g
  462963299 27 TRRRQWGRWAAELRVPRT---RDRLWIGTFATPKEAAHAYDAALFCFYG 72
               46777**********965...4**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.9282384IPR001471AP2/ERF domain
PRINTSPR003671.0E-52435IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-152484IPR016177DNA-binding domain
SMARTSM003808.7E-202590IPR001471AP2/ERF domain
CDDcd000181.01E-192584No hitNo description
Gene3DG3DSA:3.30.730.101.1E-212684IPR001471AP2/ERF domain
PfamPF008473.1E-92872IPR001471AP2/ERF domain
PRINTSPR003671.0E-54662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MAPPLALKSR GSPSSSSGPK NLGLVGTRRR QWGRWAAELR VPRTRDRLWI GTFATPKEAA  60
HAYDAALFCF YGARVPRARR LNFPCAPRPN VPEHARVRLT IANIKAIAEK YARSLADYVV  120
PPPPVIPAAA APMVVQTAGL LLLTAVT
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00463DAPTransfer from AT4G31060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002444750.16e-40hypothetical protein SORBIDRAFT_07g027250
TrEMBLC5YIM27e-40C5YIM2_SORBI; Putative uncharacterized protein Sb07g027250
STRINGSb07g027250.12e-39(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54442555
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.15e-23ERF family protein